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TITLE
Machine learning reveals limited contribution of trans-only encoded variants to the HLA-DQ immunopeptidome.
Communications Biology 2023
AUTHOR
Nilsson, Jonas Birkelund et al.
Accurate prediction of HLA class II antigen presentation across all loci using tailored data acquisition and refined machine learning.
Science Advances 2023
Nilsson, Jonas B et al.
Subcellular location of source proteins improves prediction of neoantigens for immunotherapy
EMBO Journal 2022
Castro et al.
Localized ablative immunotherapy drives de novo CD8+ T-cell responses to poorly immunogenic tumors
JITC 2022
Hoover AR et al.
Accurate MHC Motif Deconvolution of Immunopeptidomics Data Reveals a Significant Contribution of DRB3, 4 and 5 to the Total DR Immunopeptidome
FIMMU 2022
Kaabinejadian et al.
Improved Prediction of MHC II Antigen Presentation through Integration and Motif Deconvolution of Mass Spectrometry MHC Eluted Ligand Data
J. PROTEOME RES. 2020
Reynisson et al.
Immunological ignorance is an enabling feature of the oligo-clonal T cell response to melanoma neoantigens
PNAS 2019
Linette et al.
A dendritic cell vaccine increases the breadth and diversity of melanoma neoantigen-specific T cells
SCIENCE 2015
Carreno et al.
TITLE: Machine learning reveals limited contribution of trans-only encoded variants to the HLA-DQ immunopeptidome.
Communications biology 2023,
TITLE: Accurate prediction of HLA class II antigen presentation across all loci using tailored data acquisition and refined machine learning.
Science advances 2023,
TITLE: Subcellular location of source proteins improves prediction of neoantigens for immunotherapy
EMBO Journal 2022
TITLE: Localized ablative immunotherapy drives de novo CD8+ T-cell responses to poorly immunogenic tumors
JITC 2022
TITLE: Accurate MHC Motif Deconvolution of Immunopeptidomics Data Reveals a Significant Contribution of DRB3, 4 and 5 to the Total DR Immunopeptidome
FIMMU 2022
TITLE: Improved Prediction of MHC II Antigen Presentation through Integration and Motif Deconvolution of Mass Spectrometry MHC Eluted Ligand Data
J. PROTEOME RES. 2020
TITLE: Immunological ignorance is an enabling feature of the oligo-clonal T cell response to melanoma neoantigens
PNAS 2019
TITLE: MHC-I Genotype Restricts the Oncogenic Mutational Landscape
CELL 2017
TITLE: A dendritic cell vaccine increases the breadth and diversity of melanoma neoantigen-specific T cells
SCIENCE 2015
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